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Hanging Drop Experiments

Setting up a hanging drop experiment with the NT8 involves six basicf steps: 

  1. Turning on the NT8
  2. Setting up the hardware
  3. Setting up the software
  4. Adding protein to the protein block
  5. Running the dispense
  6. Transferring the hanging drops to the experiment plate.

When you set up a hanging drop experiment with the NT8, you must be careful to set up the dispense in the opposite direction by clicking the dispense direction arrow. This is because you will flip the plate when you put the plate seal on the MRC 2 Well Crystallization Plate. We've highlighted this step with a red text in the steps that follow.

 

Power On the NT8 and Start the Software

  1. Connect the NT8 to your computer using the USB cable.

  2. Find the power switch located on the back-right of the NT8 and turn it on.

  3. Double-click the NT8 icon on your computer’s desktop. It will take a few moments for the NT8 software to load while the NT8 initializes. The instrument indicator on the bottom-left corner of the software will turn green when the NT8 is connected and ready to use.

 

Set Up the NT8 Hardware

  1. Place the LV tip caddy in its station and the MRC 2 Well Crystallization Plate on microplate station 2. Each well of the MRC 2 plate should contain about 50 μl of solution.

  2. Attach the UPV Hanging Drop MRC Plate Seal to the reference plate:

    Important: The angled corners of the plate seal should be at the right side of the reference plate. After the dispense, you will flip the reference plate horizontally to the right to place the plate seal on the experiment plate.

  3. Place the reference plate on a microplate station (angled corners of plate seal should be at the right).

  4. Place the protein strip on the protein block, and put the protein strip clamp on top of the protein strip to hold it in place. You will pipette your protein into the protein block after you set up the software.

 

Option 1: Set Up the NT8 Software Using the Hanging Drop Templates

A hanging drop experiment template is pre-installed with your software. You may use it if you plan to combine 100 nL of protein with 100 nL of well solution for a 200 nL dispense. If you choose to use this template, you must also use the MRC 2 Well Crystallization Plate and the UVP Hanging Drop Plate Seal.

 

To use this template:

  1. Click the Open Task List button .

  2. Open the Sample folder and select the Hanging Drop MRC2 100 nL Protein And 100 nL Well Solution task list.

  3. Click Open.

 

Option 2: Manually Set Up the NT8 Software

  1. Mimic the NT8’s physical setup with the software:
  2. Double-click the LV Tip Caddy image to add the Pick Tip command to the task list.

  3. Click the Repeat button  on the Task List to start the beginning of tasks that will be repeated on every column of a plate.

  4. Double-click the Wash Station image to add the Wash Tip command to the task list.

  5. Tell the NT8 to aspirate protein from the protein block:
  6. Instruct the NT8 to aspirate solution from the MRC 2 Well Crystallization plate:
  7. Instruct the NT8 to dispense the solution to the UVP Hanging Drop Plate Seal:

Important: Click the arrow above the plate grid to reverse the dispense direction so that the arrow points to the left.

  • Verify that columns 1-12 are selected next to Column (if selected, they appear in dark blue). If not, click column 1, then press and hold the SHIFT key and click column 12 to select all columns.

  • Next to Volume, enter the desired dispense volume (generally the combined volume of the well solution and the protein volume).

  • Optional: Next to Mixing, select the number of mixing cycles you want the NT8 to perform before dispensing drops.

  • Optional: Next to Z-Offset, you may choose to leave Flexible Fingers enabled (indicated by the FF symbol), or you may click the FF button and then manually enter the distance the pipette tips should travel before dispensing your drops. It is strongly recommended that you leave Flexible Fingers enabled for this type of dispense.

  • Select a Liquid Class from the liquid class list.

  • Click Add.

  1. Click End Repeat in the Task List to select it.

  2. Double-click the Waste Station to add the Dispose Tip command to the Task List.

  3. Optional: Save your Task List by clicking the Save button .

 

Add Protein to the Protein Block

 

Run the Hanging Drop Dispense

 

Transfer the Hanging Drops to the Microplate

  1. When the dispense has completed, take the microplate and place it on the HD seal jig transfer. The A1 position should be at the top-left corner.

  2. Place the UVP Seal and the reference plate on the microplate by carefully flipping it over horizontally above the microplate. Use the three steel pins to guide the reference plate into place. The angled edges of the UVP Seal should match the angled edges of the microplate. Once in place, press down firmly.

  3. Carefully slide the reference plate to the right. The adhesive surface on the UVP Seal should keep it in place while you remove the reference plate.

  4. Use a microplate seal roller to secure the UVP seal to the microplate surface to assure each well is properly sealed.

 

Related Topics


NTC-V28R016

 

 

 

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