Release Notes¶
Version 4.9 Hotfix 1¶
Build Date: February 24, 2025¶
Added:
[Experiment Page] Breadcrumbs in opened experiments, displaying their positions in the software hierarchy.
[Experiment Page] A tooltip displaying morphology score details when hovering over a drop’s composite score.
[Explore Menu] [Top images by score] The composite score on a drop’s top right when viewed in the Full Image tab.
[Explore Menu] The EDIT BARCODE feature.
[FSS] [Backend] A feature to suspend and resume image sending from ROCK MAKER to FSS, allowing the FORMULATRIX Scoring Server to manage image sending.
An icon for protein formulations with variants.
Improved:
[Experiment Page] [Score Panel] The user interface of the Auto Score tab to separate morphology scores and CPOX classifications.
Changed:
[Storage Info] The system to remove the progress bar upon completion.
[Experiment Page] [Score Panel] The SEND IMAGE button in the Auto Score tab to SEND INSPECTION.
[Experiment Page] [Score Panel] The Final Score Score [] field in the Auto Score tab to Composite Score.
[Experiment Page] [Add Layer] The Screen option to Screen Layer.
The Barcode button name to Print Barcode and its icon from a barcode to a printer.
Fixed:
[Experiment Page] [Find Drops] The malfunctioning hotkey to filter wells with the same ingredients.
[Ingredient Report] The displayed short ingredient name when generating a report with the Long Ingredient Name option set in the Ingredient Name Preferences of the Ingredient Report Options dialog box.
[Hits Report] The displayed screen name instead of the ingredient information in the Drop Info.
[Settings Menu] [License Submenu] The incorrect version date information in the License Status.
The score information exceeding the well’s frame in the experiment report.
[Experiment Page] [Bottom Bar Buttons] The blank Plate button, leading to an error when clicked.
[ROCK MAKER Database] The unremoved subitems in the database after deleting the parents from the Recycle Bin.
[Setup Menu] [Ingredients Submenu] The untidy layout when opening an ingredient through the Open button.
[Experiment Page] [Image Report Options Dialog Box] The duplicated drop options in the Drop dropdown.
An error message displayed behind the Create Protein Variant dialog box when importing an invalid protein file.
[Search and Filter] The untidy layout in the Single Drop Report Options dialog box.
[Experiment Page] Multiple interesting scores in a drop image when scored by constantly pressing the hotkey.
[Experiment Page] [Select Ingredients] The slow performance when typing the ingredients in the Search Ingredients field.
[Explore Menu] The active OPEN button after creating a project or folder.
[Experiment Page] [Fragment Layer] An error when saving an experiment with an updated fragment screen.
[Explore Menu] The undisplayed default lot information in the screen side panel of a copy screen.
[Experiment Page] [Custom Layer] The unreduced Available Conditions value when adding a condition to the layer.
[Setup Menu] [Ingredients Submenu] An unclear error message when merging ingredients with duplicated pH values.
[Setup Menu] [Plate Types Submenu] Editable inactive fields when adding a Screen Lot Plate type.
[Experiment Page] The truncated plate barcodes in an experiment with multiple plates.
[Experiment Page] [Image Submenu] The displayed Visible (Default) in the imaging setting button when opening an unavailable drop image of a different imaging setting from the Top Scored Images tab of the side panel.
[Setup Menu] [Ingredients Submenu] The missing Action header of the column for Edit buttons in the Protein Type dialog box.
[Experiment Page] [Harvesting Panel] The displayed back button causing an error when clicked.
[Fragment Screen Page] An error when deleting a fragment screen after deleting another one without saving changes.
[Experiment Page] [Harvesting Panel] The displayed deleted synchrotron trip in the Crystal Selection section when assigning a crystal.
[Search and Filter File] [Image Tools Panel] The malfunctioning manual Image Tuning mode.
[Searches] [Image Tools Panel] The editable values in the auto Image Tuning mode.
[Search and Filter] [Info Panel] The mismatched well volume information in the Protein and Well tabs.
[Searches] [Info Panel] The undisplayed ingredient unit and type in the Well tab.
[Setup Menu] [Crystal Container Submenu] The red highlight when deleting an in-use puck or dewar.
[Synchrotron Trip] The malfunctioning close button in the Warning dialog box when selecting a dewar.
[Experiment Page] [Harvesting Panel] The Select All applied to all synchrotron trip chips instead of only to the selected chip.
[Experiment Page] The off-center Target Type dialog box when copying and pasting a well.
[Setup Menu] [Ingredients Submenu] The reset list of the Type column quick search after saving changes in a modified ingredient.
[Experiment Page] An error when saving an experiment with linked layers containing modified ingredients.
[Explore Menu] The unapplied Default number of top images by score(Max 100) set in Global Preferences to the Show top [] images by score of the project side panel.
[Setup Menu] [Ingredients Submenu] The Ingredient Definition dialog box not automatically closing after saving changes.
[Setup Menu] [Ingredients Submenu] The required service restart to delete a formerly in use ingredient.
[Experiment Page] [Harvesting Panel] The untidy layout of the APPLY button in the Select Synchrotron Trip panel.
[Seed Experiment] The unapplied seed name changes in the Explore menu when reopening the seed.
[Explore Menu] [User Interface] The incorrect Recycle Bin position.
[Imager Quota] [ROCK MAKER Version 4 Integration] The unlisted robot in the Imager Robot section of the Imager Quota tab in ROCK MAKER Version 4 Integration.
[ROCK MAKER Lite] The displayed ADD button in the Explore menu.
[Experiment Page] [Canvas Menu] The displayed Save Image dialog box when clicking the Save button.
[Experiment Page] [Tools Panel] [User Interface] The untidy layout of the Image Tuning section when all sections were expanded.
[Searches] The Search field in the Customize Columns panel inapplicable to parent node parameters.
[Setup Menu] [Ingredients Submenu] The ability to enter a buffer pH value of more than 14.
The undisplayed information in the Hits By Experiment table of an instant drop report.
[Ingredient Report] The displayed short ingredient name when generating an ingredient report with the Long Ingredient Name and more than 2 columns set in the Ingredient Report Options dialog box.
The failure to paste or move items to the Projects node.
[Explore Menu] The intermittently undisplayed top 100 images by score information on the side panel when selecting a project or an experiment.
[Experiment Page] [Info Menu] The reuse of an existing experiment name in a new experiment.
[Settings Menu] [Global Preferences] The same starting point with the previous property’s scroll position when moving to another property.
[Settings Menu] [License Submenu] The untidy text of the CHECK UPDATE button in the License Update section.
[Experiment Page] The undisplayed newly created fragment screen in the Select Fragment panel.
[Experiment Page] The malfunctioning editing and deleting features in the Imaging Schedule section of the Info menu when the values in the Day or Hour column was 0.
[Protein Layer] The unlisted newly created protein in the corresponding folder when opened in the Layers Design panel.
[Experiment Page] [Info Menu] The displayed disabled plate type in the Plate Type dropdown of the Experiment Info section.
[Experiment Page] [Info Menu] [Imaging Schedule Section] An irrelevant Custom scheduling-related warning message when selecting another scheduling option.
[Experiment Page] The unapplied row and column number changes in the Canvas menu.
[Experiment Page] The malfunctioning Best Fit in the Canvas menu after changing the number of plate rows and columns.
[Experiment Page] [Tools Panel] The displayed dropdown options of the Imaging Setting after moving to another section.
[Experiment Page] [Canvas Menu] The disappearing ingredient color in the Design submenu after saving plate type changes.
[Explore Menu] The incorrect tooltip when hovering over the Top Scored Images button in the side panel.
The displayed Generating Images… prompt on the bottom right bar even after generating a composite image.
[Experiment Page] The modifiable deleted synchrotron trip formerly opened in a tab.
[Experiment Page] [Tools Panel] An indelible overlapping POI.
[Experiment Page] [Drop Menu] [Harvesting Panel] The active scoring hotkey when working on the Harvesting panel.
[Licensing] The un-updated license when updating Concurrent to Seat or Hybrid license without restarting the service.
[Settings Menu] [Administrator Submenu] An error when adding a user after discarding another one without saving changes.
[Experiment Page] [Layers Design Panel] The unadded screen condition when adding a screen with a loading well condition information in the Edit Screen panel.
[Protein Formulation] An irrelevant error when saving a protein formulation with an edited standard ingredient.
An error when logging in to ROCK MAKER without an internet connection.
[Seed] The undisplayed restored seed in the Select Seed section of the Layers Design panel.
[Fragment Screen] The mismatched fragment screen title in the browser tab and its actual name.
[Experiment Page] [Tools Panel] The + cursor icon appearing only when using Image Tools for the first time.
[Experiment Page] [Harvesting Panel] The + cursor icon appearing only during the first crystal selection.
[Setup Menu] [Ingredients Submenu] The ability to create a buffer ingredient with an empty Stock pH column.
[Experiment Page] [Canvas Menu] [Image Submenu] An intermittent error when zooming in the drop images in the Canvas area.
[Search All] The inactive Search button when entering less than 3 characters in the Search field.
[Synchrotron Trip] The off-center Select File .csv field and BROWSE FILE button and the unclear error message when importing an invalid file format in the Import Synchrotron Trip Result wizard.
[Experiment Page] [Info Menu] The duplicated row in the Imaging Schedule section when clicking a checkbox of a schedule with a 0 hour or day.
[Explore Menu] The failure to mark an individual plate as dispensed in an experiment with multiple plates.
[Experiment Page] [Score Panel] The inconsistent order of the auto score group in the Auto Score tab when navigating through wells.
[Experiment Page] An error when discarding row and column number changes from the Canvas menu.
[Installer] The removed service credentials during software upgrade.
[Auto Scoring] The auto scoring process repeatedly trying to score corrupted images in the database.
[ROCK MAKER Lite] An issue where ROCK MAKER Lite included some features that were not in ROCK MAKER Web.
[Experiment Page] [Find Drops Panel] The drop 1’s score information displayed in the drop 2’s information and vice versa.
[Setup Menu] [Crystal Container Submenu] The unremoved deleted puck and dewar from the list after saving changes.
[Save Image] An error when saving images of an experiment with ‘/’ character in its name.
An error when deleting a protein with a protein variant.
[Searches] An error when clicking the Filter Items button in the Filter panel during search result loading.
[Screen Experiment Wizard] An error when generating a screen experiment with a restored screen or protein.
[Screen] The undisplayed plate barcodes of the Default Lot in some commercial screens’ side panels and experiment pages.
The untidy content in the RockMaker Update dialog box.
Removed:
[Experiment Page] [Score Panel] The Auto Score Threshold button from the Filter tab.
[Experiment Page] The Protein Formulation Wizard option from the Wizard button on the top bar.
Version 4.9 BETA¶
Build Date: January 20, 2025¶
Added:
[Setup Menu] [Ingredient Submenu] Highlights and error tooltips on the duplicated aliases and CAS numbers.
[Fragment Screen] A validation to prevent entering a negative value in the Conc. field.
[Explore Menu] The Recycle Bin to store deleted items for a defined number of days before permanently deleting them.
[Explore Menu] A feature to display top images by score in the project or experiment side panel.
[Auto Scoring] The latest Sherlock Version 3 with the ability to rank crystals based on their morphology.
Improved:
The Screen Experiment Wizard’s performance to generate a large number of experiments.
The Protein Formulation tab to include a feature to create protein variants and import protein data.
[Experiment Page] [Canvas Menu] The Score panel with relevant settings in each tab (Filter, Scores, and Auto Score).
[ROCK MAKER Storage] SONICC and UV image format from JPG to PNG in the Composite view.
Changed:
[Searches] The Custom button to Columns.
[Experiment Page] The colors of the project and folder icons in the Select Protein panel to orange.
[Licensing] The Status column to Inactive Time, displaying relative time.
Fixed:
[Synchrotron Trip] [Unassigned Crystals Submenu] The inconsistent line spacing in the Crystal Information section.
[Experiment Page] A blank space between the image and the bottom bar.
[Experiment Page] [Edit Ingredient Panel] The Vary Along and Start fields unaligned with the Concentration text.
[Experiment Page] The incorrect layout of the Layer Options and Concentration sections.
[Create Seed Dialog Box] The unaligned layout of the Seed Source and Notes sections.
[Setup Menu] [General Submenu] A blank space at the bottom of the Experiment Temperature Configuration section.
[Setup Menu] The whole row selection when clicking only the Hit checkbox in the Well Score Configuration section.
[Screen Experiment Page] The displayed dropdown button in the navigation menu.
[Experiment Page] [Harvesting Panel] The oversized synchrotron trip chips in the Crystal tab.
[Experiment Page] The un-highlighted images with hit scores when navigating through drops in a well.
[Explore Menu] The active Send to Autoscore option in the More button when clicking a protein.
[Experiment Page] [Canvas Menu] [Image Submenu] The active AUTO button in the Tuning panel during an automatic mode.
[Setup Menu] [Ingredients Submenu] The unapplied stock vendor other than Stock 1’s when merging ingredient stocks.
[Setup Menu] [General Submenu] [Experiment Temperature Configuration Section] The not-fully displayed Incubation Temperature text in the corresponding field.
[Explore Menu] The active Send to Autoscore option in the More button when clicking a dispensed experiment.
[Settings Menu] [Global Preferences Submenu] [Advanced Properties] The question mark icon replacing the trademark sign in the Screen: Import: Allow Fluidigm CSV file import field.
[Main Page] The undisplayed Image Management Task and Search and Filter items in the Recently Opened section.
[ROCK MAKER Lite] [Experiment Page] [Drop Menu] The active Save button when opening a drop with no image.
[ROCK MAKER Lite] The available options of multiple imaging settings, focus levels, and regions when saving a drop image.
[Experiment Page] [Tools Panel] The added ROI and POI numbers, continuing the removed items’ numbers instead of replacing them.
[ROCK MAKER Installation] An error when backing up the data with insufficient disk space.
An unclear error message when previewing an image report of an unimaged drop.
[Screen Experiment] An unclear error message when importing an empty XML screen file.
[Synchrotron Trip] An incorrect confirmation message when deleting a synchrotron trip without assigned crystals.
[Experiment Page] [Canvas Menu] The undisplayed drop images upon selecting Any Hit in the Score panel after manually marking scores as hits.
An error when deleting an unused fragment screen.
[Settings Menu] [Global Preferences] The unapplied settings of the Drop, Scoring, and Miscellaneous properties.
[Experiment Page] The active Image Now button in a disabled imaging mode.
[Image Management Task] The undisplayed task cancellation notification on the notification panel.
[Experiment Page] The active Seed button when selecting a non-imaged well.
[MARCO] An error in the MARCO log file despite completed scoring.
[Screen Experiment] The editable Container field in the Screen Lots section of the default screen lot.
The mismatched number of plates in the created and default screen lot in an experiment with multiple plates.
The duplicated environment and database information in the log file.
[Experiment Page] [Tools Panel] The image tools of a certain drop applied to a different drop.
The different protein IDs between the one in the actual experiment and the experiment report.
An unaligned drop information in the image report.
The failure to delete a folder imported using Batchload Experiment Wizard.
[Explore Menu] The considerable time needed to copy and paste items within the same folder.
[Experiment Page] The undisplayed image in the Compare menu when navigating through the Plate and Imaging Settings from the bottom bar buttons.
The displayed upgrade notification after upgrading ROCK MAKER version 4.
[Experiment Page] The inactive Drop, Region, Imaging Settings, and Inspections buttons in the bottom bar of the Compare menu.
[Settings Menu] [Global Preferences] The unreversed settings when discarding changes.
The missing protein layer after adding another layer to a copied experiment.
[Search and Filter] The malfunctioning right and left arrow keys when navigating through wells.
[Screen Experiment Wizard] The malfunctioning NEXT button in the SELECT PROTEIN section, preventing users from moving to the next section.
[Explore Menu] The un-updated URL when reloading the tab after deleting a folder or project.
[Screen Experiment Wizard] An error when generating experiments with multiple-plate screens.
[Screen Experiment Wizard] An error when generating screen experiments with any JCSG Core screens.
[Experiment Page] An error when copying and pasting a screen.
An error when accessing ROCK MAKER Lite with a hybrid license.
[Support] The incorrect dialog box occurring after selecting the Generate Test Email option.
Error emails sent without log attachments.
[Batchload Experiment Wizard] An error when importing a large number of plates.
[Experiment Page] The displayed “Image now submitted” notification in the disabled Imaging Experiment.
[ROCK MAKER with Hybrid License] The undisplayed license selection page upon login to ROCK MAKER with the previously canceled license selection.
[Screen Experiment Wizard] The unselected newly created folder in the Select Location for the Experiment(s) section.
[Optimization Wizard] The unselected newly created folder or project.
[Setup Menu] [Well Score Configuration] The unapplied Value and Color to existing experiments.
[Auto Scoring] The repeated checking of skipped images (the ones removed from Rock Maker Storage).
[Image Management Task] The undisplayed log file description after executing a deletion task.
[Experiment Page] [Canvas Menu] The Canvas menu displaying only images from inspections with imaging durations of 60 minutes or less.
The long loading time during startup when accessing very large database statistics in a log, causing timeout exception and software restart.
[Experiment Page] [Harvesting Panel] Excessive error logging, consuming disk space, in the log file when clicking the Crystal Definition button of a crystal assigned to a deleted synchrotron trip.
Removed:
[Screen Experiment Page] The drop information in the Ingredient submenu.