Instrument Overview

Before you set up the aµtoPULSE instrument, familiarize yourself with the instrument’s specifications, components, and accessories.

Specifications

Dimensions

Instrument Dimensions

Instrument Dimensions (With Door Open)

  • Height with door closed: 830 mm (32.7”)

  • Height with door open: 1070 mm (42.2”)

  • Width: 835 mm (32.9”)

  • Depth: 740 mm (29.2”)

  • Weight: 81 kg (178.6 lbs)

Pressure and Vacuum Requirements

aµtoPULSE requires vacuum and pressure to actuate the chip’s diaphragm, liquid control valves, and each station’s clamp, supplied by the included FORMULATRIX Pump Box.

Electrical Requirements

  • Voltage Range: 100V-240V AC

  • Frequency Range: 50-60 Hz

  • Power: Max. 320 W

  • All outlet types are supported.

System Requirements

The following are the minimum system requirements to run the aµtoPULSE software.

Minimum

Recommended

Browser

Google Chrome version 97 or later

Latest Google Chrome version

Screen Resolution

1366 × 768

1920 × 1080

Screen Size

11”

14”

Note

The instrument and the control device must be on the same network to connect.

Instrument Components

Front View

aµtoPULSE Front View

Gantry

The gantry moves tubes and chips during operation. It consists of the following main parts:

  • Gripper: Picks up, moves, and releases the tubes and chips between the station and the deck.

  • Arm: Controls the gripper movements and ensures proper alignment.

Arm and Gripper on the Gantry

Deck

The deck holds all the tubes and chips you need to run an experiment. It consists of 12 nests in which you can place the compatible tube racks and chip racks.

The aµtoPULSE Deck

Door

The door allows access to the internal components. For safety reasons, opening it during a protocol run will pause the gantry and trigger warning indicators in the Status Bar.

LED Indicator

The LED indicator displays various colors, each indicating a different instrument status during operation.

Color

Description

Blue

aµtoPULSE is initializing. This may take a few seconds.

Rainbow

aµtoPULSE is idle.

White to Green

aµtoPULSE running a protocol. The indicator turns fully green when the protocol is complete.

Yellow

aµtoPULSE is paused.

Red

aµtoPULSE has encountered an error.

Station

The 5 stations in aµtoPULSE support chip operation, liquid transfer, and volume measurement. Each station is connected to the peristaltic pumps on the instrument’s right side via peristaltic tubing.

There are five stations configured as a combination of Concentration and Cleaning stations (e.g., 3 Concentration and 2 Cleaning, or 4 Concentration and 1 Cleaning). Concentration stations perform sample concentration and buffer exchange, while Cleaning stations are dedicated to chip-cleaning.

The aµtoPULSE Stations in a 3-2 Configuration

The aµtoPULSE Stations in a 4-1 Configuration

The Station’s key components include:

  • Base Chip: Connects with the chip’s valves and pumps to control the liquid from the instrument.

  • Chip Clamp: Holds the chip clamped during operation to ensure an airtight seal inside the chip.

  • Buffer Needle: Transfers buffer solution from the reservoir to the conical tube. The right buffer needle is inactive in Concentration Stations and only functions in the Cleaning Stations as a cleaning solution outlet.

  • Permeate Tubing Assembly: Facilitates the transfer of permeate liquid.

  • Scale: Measures the weight of the tubes and sample volumes using a load cell. The Conical Tube Scale is used for high-volume samples (in 50 and 15 mL conical tubes), while the Microtube Scale handles low-volume samples (in 1.5 mL microtubes).

Note

On the Cleaning Station(s), the center microtube scale is replaced by a drain to pump waste out.

Components in the Concentration Station (Left); Components in the Cleaning Station (Right)

Waste Tray

The waste tray under the deck collects any spillover liquid. Pull it out to detach it from the instrument.

Waste Tray

Right Side View

aµtoPULSE Right Side View

Power Button

The power button turns the instrument on and off. This button indicates various colors to indicate the following status and behavior:

Color

Description

Red (Blinking)

The instrument is connected to the power source and is powering up. Wait until the power button turns solid red.

Red (Solid)

The instrument has been powered up and is ready for initialization. You can press the button to activate the instrument.

Green (Blinking)

The instrument is shutting down or initializing to connect with the software.

Green (Solid)

The instrument is active and connected to the software.

Chiller Connector Hole Port

The chiller connector holes provide a pass-through for the chiller connectors to reach the cold pad on the deck.

Note

The Chiller set is an optional accessory. Contact FORMULATRIX support for installation.

Connection Panel 1

  • Ethernet Port: Connects the aµtoPULSE wired network to your computer.

  • USB Port: Provides a service interface used by support personnel for debugging and maintenance.

Ethernet Port and USB Port

Peristaltic Pump Panel

  • Concentration Station Pump: Each Concentrating Station’s pump transfers buffer from the reservoir to the left Buffer Needle of their respective stations.

  • Cleaning Station Pump: Transfers buffer and cleaning solutions from their reservoirs to the Buffer and Cleaning Solution Needles.

  • Waste Drain Pump: Transfers liquid from the Cleaning Station drains to the waste reservoir.

Components of the Peristaltic Pump Panel in 3-2 Configuration (Left); Components of the Peristaltic Pump Panel in 4-1 Configuration (Right)

Connection Panel 2

  • Pneumatic Port: Connects to the FORMULATRIX Pump Box for the required pressure and vacuum inputs. The ports are labeled P and V accordingly.

  • Waste Level Sensor Interface: Connects the instrument to the waste reservoir’s level sensor.

  • E-Stop Port: The optional emergency stop button connects to the E-stop ports to quickly stop the aµtoPULSE when necessary. Contact FORMULATRIX support for assistance with this feature.

Pneumatic Port, Waste Level Sensor Interface, and E-Stop Port

Buffer Reservoir

The buffer reservoir holds buffer solution, used by the instrument when selected as the source.

Side Vent

The side vent allows the power supply access to fresh air.

Cleaning Solution Reservoir

The cleaning solution reservoir holds cleaning solution, used by the instrument when the cleaning cycle is enabled.

Waste Container

The waste container collects waste permeate liquid from the instrument during the filtration process for safe disposal.

Power Panel

  • Power Switch: The power switch turns the instrument’s power on or off.

  • Power Entry: The power entry supplies the instrument with mains electricity.

Power Switch and Power Entry

Back View

aµtoPULSE Back View

Air Vent

Two internal fans at the back draw air through the filter foam to maintain operating temperature. The air is then exhausted from the two ventilation fans at the top.

Chip and Labware

Chip Overview

Chips are the primary filtering device of aµtoPULSE. They come in two membrane material options and several MWCO options:

MWCO

Membrane Material

Membrane Material

mPES

RC

5 kDa

10 kDa

30 kDa

50 kDa

100 kDa

300 kDa

The aµtoPULSE chip consists of the following parts:

Chip Front View (Left); Chip Back View (Right)

Barcode

The barcode identifies the membrane material and its MWCO.

Filter Membrane

The filter membranes separate permeate from the sample, with both membranes (upper and lower) being used in high-volume filtration, while only the lower membrane is used for low-volume filtration.

Diaphragm

The two diaphragm pumps circulate the sample and buffer through the chip membrane.

Transfer Tube

The transfer tubes allow the sample and buffer to flow into and out of the chip from the tubes.

Pick-up Notch

The pick-up notch ensures the correct gripper position when picking up the chip.

Air Port

The chip air port receives air flow from the instrument, actuating the diaphragm pump and control valves to control the liquid flow.

Labware Overview

Tube Adapter

The tube adapters allow the sample and buffer tubes to rest securely on the scales, providing accurate weight values for the instrument.

1,5 mL Microtube Adapter (Left); 15 mL Tube Adapter (Center); 50 mL Tube Adapter (Right)

Conical Tube

The conical tubes hold sample and buffer in two capacities: 15 mL and 50 mL.

15 mL Conical Tube (Left); 50 mL Conical Tube (Right)

Microtube

The microtube holds 1.5 mL of sample and is primarily for small-volume operations.

1,5 mL Microtube

Important

To prevent any misalignment or collision, make sure to use a proper microtube with no caps.

Tube Rack

The tube rack holds your tubes and comes in 3 sizes:

  • 4x6 1.5 mL Microtube Rack (24 microtubes)

  • 3x4 15 mL Conical Tube Rack (12 tubes)

  • 2x3 50 mL Conical Tube Rack (6 tubes)

1,5 mL Microtube Rack (left); 15 mL Tube Rack (Center); 50 mL Tube Rack (Right)

Chip Rack

The chip rack accommodates six chips and features a built-in alignment design for easier and correct placement.

Chip Rack

Note

To purchase aµtoPULSE chip and other accessories, contact sales@formulatrix.com.

Cooling Rack

The Cooling Rack is an optional accessory installed by the support team upon request. It maintains low temperatures during the workflow to preserve sample integrity and ensure consistent results for temperature-sensitive samples. It is compatible with:

  • 1.5 mL microtubes

  • 15 mL conical tubes

  • 50 mL conical tubes

1,5 mL Microtube Cooling Rack (Left); 15 mL Conical Tube Cooling Rack (Center); 50 mL Conical Tube Cooling Rack (Right)

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