System Properties

ROCK MAKER provides you with a wide variety of system properties that can be used to customize your ROCK MAKER experience. System properties are divided into two different categories, general and plate properties. General properties control the various features of ROCK MAKER, and plate properties determine the way plates are managed for your experiments. System properties can be accessed from three different menus: Global Preferences, Group Preferences, and User Preferences. To learn more about the difference between these types of preferences, read Personalization.

General Properties

The General Properties as Seen from Global Preferences Menu

The General Properties as Seen from Global Preferences Menu

ROCK MAKER provides you with several types of General Properties that allow you to customize the software’s many features.

In this topic, you will learn about:


Note:
1 — Property is available in Global Preferences.
2 — Property is available in Group Preferences.
3 — Property is available in User Preferences.

Project Properties

System Property

Default Setting

Description

Default Crystal Name 1,2,3

<PlateID>_<Well>_<Drop>Crystal01

Specifies the default naming format for a crystal used when a crystal is harvested. You can select one naming format from the dropdown list, as desired.

Default Imaging Schedule 1,2,3

None

Specifies the default imaging schedule assigned to an experiment. In Default Imaging Schedule there are 5 options: (None), Daily/Weekly, Daily/Weekly Nightly, Fibonacci, and Fibonacci Nightly. For more information, please read Image Scheduling.

Default Imaging Settings 1,2,3

None

Determines which imaging setting will be used. You can add more imaging settings in ROCK MAKER by adding the desired imaging settings to Imaging Settings, located in the Imaging folder in the Explorer. For more information, please read Defining Imaging Settings.

Default Owner 1,2

None

Determines the owner of the project(s) in ROCK MAKER. The Default owner list contains all people who are set up as users of ROCK MAKER.

Default Seed Name 1,2,3

<PlateID>_<Drop>_<Well>_Seed

Specifies the default naming format used when you create a seed. You can select one naming format from the dropdown list, as desired.

Default Seed Tree Node Name

Seed

Specifies the default name for a Seed folder in ROCK MAKER Explorer.

Experiment Properties

System Property

Default Setting

Description

Default Dispensing Robot 1,2

None

Determines which Dispensing Robot you are going to use.

Default Owner 1,2

None

Determines the owner of the experiment(s) in ROCK MAKER. The Default owner list contains all people who are set up as users of ROCK MAKER.

Default Plate Type 1,2,3

2 Drop Intelliplate

Determines the type of microplate that you will use in the experiment. For more information, please read Containers Setup.

Experiment Default Imaging Schedule 1,2,3

Fibonacci Nightly

Specifies the default imaging schedule assigned to an experiment. There are four options: Daily/Weekly, Daily/Weekly Nightly, Fibonacci, and Fibonacci Nightly. For more information, please read Image Scheduling

Incubation Temperature 1,2,3

20

The default incubation temperature applied to each new experiment. This is the temperature at which the plate is stored in order to grow crystals. For more information, please read Incubation Temp (Degrees C) in Creating an Experiment.

Plate Column 1,2,3

1

The number of columns of plates in the experiment’s canvas. You can change this value only if the experiment canvas is blank.

Plate Row 1,2,3

1

The number of rows of plates in the experiment’s canvas. You can change this value only if the experiment has not yet been dispensed.

Setup Temperature 1,2,3

20

This is the temperature at which the plate was set up. For more information, please read Experiment Temperature Configuration in General Setup.

Show prepared status in stock picker 1,2,3

check_icon

Enables you to show the Prepared column when adding or editing a standard ingredient.

Canvas Properties

System Property

Default Setting

Description

Canvas: Selected Layer Color 1,3

Orange

Customizes the color of the selected layer.

Canvas: Selected Well Color 1,3

Orange

Customizes the color of the selected well.

Protein Layer’s name based on Protein Formulation name 1,2,3

check_icon

Select to show the Protein Layer’s name which is based on the Protein Formulation name on the canvas.

Drop Properties

System Property

Default Setting

Description

Annotation text default font 1,2,3

Microsoft Sans Serif, 10pt

Customizes the Annotation default font.

Point of Interest Cross Mark Color1,2,3

Red

Determines the color of the Point of Interest cross hair.

Reset Drop Location in Overview image 1,2,3

check_icon

Determines the zoom setting to reset the user switches for overview region when the drops find drop location.

Scoring Properties

System Property

Description

Allow Auto Scoring using ‘Sherlock’ Model

Allows you to switch the Sherlock on or off.

Allow Auto Scoring using ‘Sherlock’ model ‘Stable’ version

Allows you to switch the stable version of Sherlock on or off.

Allow Auto Scoring using ‘Sherlock2’ model

Allows you to switch the Sherlock2 model on or off.

Allow Auto Scoring using ‘Sherlock2’ model ‘Stable’ version

Allows you to switch the stable version of Sherlock2 model on or off.

Allow Auto Scoring using ‘Sherlock3’ model

Allows you to switch the Sherlock3 model on or off.

Allow Auto Scoring using ‘Sherlock3’ model ‘Stable’ version

Allows you to switch the stable version of Sherlock3 model on or off.

Allow Auto Scoring using ‘Sherlock4’ model

Allows you to switch the Sherlock4 model on or off.

Allow Auto Scoring using ‘Sherlock4’ model ‘Stable’ version

Allows you to switch the stable version of Sherlock4 model on or off.

Allow Auto Scoring using ‘Sherlock5’ model

Allows you to switch the stable version of Sherlock5 model on or off.

Allow Auto Scoring using ‘Visible’ model

Allows you to switch the visible model on or off.

Allow Auto Scoring using ‘Visible’ model ‘Stable’ version

Allows you to switch the stable version of visible model on or off.

Allow disputed score drawing

Allows you to dispute the score drawing.

AutoScorer upgrade service Port

Allows you to switch the AutoScorer upgrade service Port on or off.

Delete Score via hotkey 1,2,3

Allows you to delete scores using Hot Keys. For more information, please read Hot Keys in General Setup.

Enable FRAP Auto Score 1,2,3

Select to display computerized autoscores for FRAP images. For more information, please read FRAP Scores in Scoring Overview.

Enable MARCO Auto Dispute processing

Allows you to enable the MARCO/Sherlock auto-dispute processing.

Enable MARCO Auto Score

Allows you to enable MARCO/Sherlock. For more information, please read Scoring Images Using Autoscoring Models.

Enable scoring mother plate of ISO

Allows you to allow the modification of the scores in a mother plate after creating an Iterative Screen Optimization (ISO).

Enable scoring without images

Allows you to give scores to experiment results that don’t have associated images.

Enable UV/SHG/UVTPEF Auto Score

Allows you to enable computerized autoscoring of UV and/or SONICC images. For more information, please read Scoring Overview.

Formulatrix Scorer Server URL

Allows you to determine the URL address of the FORMULATRIX auto scoring server.

Inherit Score

Allows you to use a score from an old image to be displayed as the score on a new image taken of the same drop. For more information, please read Inherited Scores in Scoring Overview

MARCO Scorer Server URL

Determines the IP address of the MARCO/Sherlock server.

Mark score as disputed when difference is more than

Enables the system to automatically mark a certain score as disputed.

Monthly retraining images limit

Enables you to define the monthly limit of retraining images.

Move to next well after scoring

Allows you to automatically advance to the next image when you assign a score in an image in ROCK MAKER.

Restart from first well once the last is reached

Allows you to automatically move back to the first image when you have assigned a score to the last image in ROCK MAKER.

Send MARCO status emails to support

Allows you to send MARCO/Sherlock status emails to support.

Explorer Tree Properties

System Property

Default Setting

Description

Follow me 1,2,3

check_icon

Enables ROCK MAKER to follow your experiment activity with a highlight so that you can get back to your current experiment in an instant.

Plate Node Format 1,2

<plateNum>, <plateID>, <barcode>

Determines the Plate Node format in ROCK MAKER.

Show Confirmation Dialog when moving any items 1,2,3

check_icon

Select this box to show a confirmation dialog when you are about to move items in ROCK MAKER.

Show Print Barcode menu in Tree 1,2,3

check_icon

Select this box to show the Print Barcode menu in the explorer.

Tree Width

265

The default width of the Explorer tree, in pixels.

Imaging Properties

System Property

Default Setting

Description

Auto Leveling High threshold

0.2

Determines the percentage of pixels omitted at the right side of the image tuning histogram after setting the upper limit of the tonal range.

Default image type

ef

Determines which image type(s) will be shown on the Canvas. You can choose from extended focus (ef), focus level (fl), and/or best focus (bf).

Display Focus Level Thumbnails by Default

Not Selected

Select to enable the automatic display of Focus Level thumbnail images when a user opens an image in Well, Drop, or Compare view.

Enable Image Now in RockMakerWeb

check_icon

Select to enable the imaging now feature in ROCK MAKER Web.

Focus level width scale factor

1

Determines the rate of enlargement applied to your saved focus level images.

Image Now Priority

0

Determines the immediate priority of plates to be imaged in the ROCK IMAGER Software.

Image Quality - Fluorescence (100%)

90

Adjusts the percentage value of fluorescence image quality, as desired. Setting this quality to 100% will result in a “lossless” compression algorithm being used, ensuring the image produced is of the highest quality. In this case, the image size will be approximately 10 times larger than its standard.

Image Quality - Fluorescent Combined Focus

High Quality Always

Determines the quality of image used for fluorescent EFI images:

  • High Quality: Images are stored in a format which does not affect the quality of the image (PNG). These images can be 10 times larger than standard.

  • Standard Quality: uses the compression factor used in the Image Quality - Fluorescence property.

Image Quality - Visible (%)

80

Determines the quality of image used for visible images: Adjusts the percentage value of visible image quality, as desired. Setting this quality to 100% will result in a “lossless” compression algorithm being used, ensuring the image produced is of the highest quality. In this case, the image size will be approximately 10 times larger than its standard.

Image Quality - Visible Combined Focus

Use Standard Quality

  • High Quality: Images are stored in a format which does not affect the quality of the image (PNG). These images can be 10 times larger than standard.

  • Standard Quality: uses the compression factor used in the Image Quality - Visible property.

Image store name

RockMaker Storage

Allows you to type a name for the image store in ROCK MAKER where your saved images are located.

Imaging Task Window Size (hours)

8

Determines the time span used to decide which inspections to group together in a specific time range.

Store lossless images (HD Photo only)

Not Selected

Determines whether to use a lossless compression parameter for the JPEG extended range codec.

Thumbnail image type

ef

Determines which image type(s) will be shown as thumbnails. You can choose from extended focus (ef), focus level (fl), and/or best focus (bf).

Truncate drop 1 file name

Not Selected

Supports legacy systems where there is only a single drop and the drop number is not required to store images.

Warn if deleting images more than this value

5

Notifies you if you are about to delete images whose value is higher than the desired value.

Label Printing Properties

System Property

Default Setting

Description

Automatic form feed count 1

0

Determines the number of blank plate labels to be ejected from the printer before printing can resume.

Barcode system name 1

Not Available

Allows you to choose between Low Profile or Standard barcodes.

Date format 1

MM/dd/yy

Determines the date format for the printed labels.

Ingredients ID encoding method 1

Radix36

Specifies the method be used to encode Ingredient ID. There are three options available; Radix36, Plain text, and Base64.

Ingredients: Barcode Command 1

^ XA^BY2,,~SD22^PW630^ LH0,32^FO10,24^ACN, 10,5^FDl ine1^FS^FO10,41^ACN, 10,5^FDline2^FS FO10,58^ACN, 10,5^FDline3 ^FS^FO430,18^BCN,90, N ,N,N^FDbarcode^FS^XZ

Sets the barcode command for ingredients.

Ingredients: Character per line 1

24

Determines the total characters per line that appear in the printed label for ingredients.

Ingredients: Display barcode text 1

Not Selected

Shows barcode text in Ingredient information.

Ingredients: Empty Ingredients barcode 1

Not Available

Sets the barcode value for an ingredient that is empty.

Ingredients: Generic barcode length 1

5

Sets the length for the Ingredient barcode.

Ingredients: Horizontal barcode offset 1

270

Sets the horizontal space for the Ingredient barcode.

Ingredients: Horizontal text offset 1

470

Sets the horizontal space for the Ingredient text.

Ingredients: Print date 1

Not Selected

Prints the date on the Ingredient label.

Ingredients: Vertical barcode text offset 1

60

Sets the amount of vertical space for the Ingredient barcode text.

Label printer 1

Zebra

Specifies the name of the label printer. There are two options available: Zebra and Sato.

Label printer 1.2

SomeServerZebra

Specifies the full name of the label printer.

Multiple copies count 1

3

Determines the number of plate labels you can print by right-clicking a plate in the Dispense Queue.

Plate ID encoding method 1

Radix36

Determines the method used to encode the plate ID. There are three options available; Radix36, Plain text, and Base64.

Plate: Generic barcode length (without prefix) 1

8

Determines the length of the barcode character, excluding the prefix.

Plates: Barcode command 1

^XA^BY2,,~SD2 2^PW630^LH0,32^FO10, 24^ACN,10,5^FDl ine1^FS^FO10,41^ACN, 10,5^FDl ine2^FS^FO10,58^ACN, 10,5^FDline3 ^FS^FO430,18^BCN,90, N,N,N^FDbarc ode^FS^FO330,58^ACN, 10,5^FDbarcode^FS^XZ

Shows the command for the plate barcode.

Plates: Characters per line 1

24

Determines the number of characters that appear per line on the printed label for a plate.

Plates: Display barcode text 1

Not Selected

Determines the amount of barcode text to appear in the plate printed label.

Plates: Horizontal barcode offset 1

270

Sets the amount of horizontal space for the plate barcode.

Plates: Horizontal text offset 1

470

Sets the horizontal range for the plate text.

Plates: Secondary barcode command 1

BG03064

The secondary plate barcode command.

Plates: Secondary barcode printing 1

Not Selected

Enables the use of the secondary barcode print layout for plates.

Plates: Secondary display barcode tex 1

Not Selected

Displays the secondary barcode layout for plates.

Plates: Secondary horizontal barcode offset 1

406

Sets the horizontal range for the secondary plate barcode.

Plates: Secondary horizontal barcode text offset 1

700

Sets the horizontal range for the secondary plate barcode text.

Plates: Secondary horizontal text offset 1

270

Sets the horizontal range for the secondary plate text.

Plates: Secondary vertical barcode text offset 1

23

Sets the vertical range for the secondary plate barcode text.

Plates: Vertical barcode text offset

60

Sets the vertical range for the plate text.

Print Label: Line 1 1

{ExperimentID:0:000000}{ ScreenLotID:0:000000 }-{PlateNumber:0:00} {S etupTemprature:0:00} {Incuba tionTemprature:0:00} {T odayDate:0:MM/dd/yy}

Sets the content of first line of the printed label.

Print Label: Line 2 1

{ProjectName}{Screen LotNumber:0:00000} {UserInitials}

Sets the content of second line of the printed label.

Print Label: Line 3 1

{ExperimentName}{ScreenLotName} ({PlateID})

Sets the content of third line of the printed label.

Print Label: Line 4 1

Not Available

Sets the content of fourth line of the printed label.

Print Label: Line 5 1

Not Available

Sets the content of fifth line of printed label.

Print Label: Line 6 1

Not Available

Sets the content of sixth line of printed label.

Print Label: minimum character per truncated tag 1

2

Determines the minimum number of characters that appear per truncated tag of a printed label.

Use generic barcodes 1

Plates & Ingredients

Determines what information appears on the barcodes, such as Plates Only, Plates & Ingredient, or None.

Use modified Base64 barcodes 1

None

Determines the format barcode of base64 from the plate such as Plates Only, Plates & Ingredient, or None.

Matrix Maker Properties

System Property

Default Setting

Description

Allow export from tree

Not Selected

Shows an option on the ribbon menu to export it to Matrix Maker.

Allow first name (Lower case)

Not Selected

Shows the first name of the Matrix Maker export user in lower case.

Catalog number

ROCK MAKER

Shows the catalog number which will be used for the Matrix Maker file.

Chemical manufacturer ID

1

Shows the chemical manufacturer’s ID.

Default screen user name

Default User

Shows the username for the default screen.

Export Type

.SQL

Determines the export file type from ROCK MAKER. There are two types, .SQL and .XML.

Export User Type

Experiment User

Determines if the export user of Matrix Maker is logged in as user or Experiment Owner.

Matrix export name

<Preparator>_<Matrix Name>_<MatrixNumber>

Determines the format of the matrix export name.

Num conditions per matrix

96

Determines the number of conditions to be exported per matrix.

Screen column count

12

Determines the number of screen columns to be exported per matrix.

Text export directory

Not Available

Selects the appropriate directory to save your .SQL matrix.

Use CASNumber (If Exists)

Not Available

Chooses whether to show CASNumber in your exported matrix or not.

XML export directory

Not Available

Selects the appropriate directory to save your .XML matrix.

Optimization Properties

System Property

Default Setting

Description

Experiment: Grid: Optimize wells into grids

Not Selected

Enables the expansion of the range between scored wells.

Experiment: Score: Optimize maximum num columns

0

Determines the maximum number of columns on the original grid layer.

Experiment: Score: Optimize maximum num rows

0

Determines the maximum number of rows on the original grid layer.

Experiment: Score: Optimize score group name

Not Available

Shows the name of the score group to be applied in wells.

Experiment: Score: Optimize score start name

Not Available

Shows the name of the score at the starting point.

Experiment: Score: Optimize score start near name

Not Available

The name of score to identify the anonymous of start name score.

Experiment: Score: Optimize score stop name

Not Available

Shows the name of the score at the ending point.

Experiment: Score: Optimize score stop near name

Not Available

Shows the name of score to identify the anonymous of stop name score.

Miscellaneous Properties

System Property

Default Setting

Description

Allow searches under searches only 1,3

Not Selected

This option ensures that all your searches will be saved under Search folder.

Batchload Sample Location 1

Under Project Folder

Determines the Batchload location. There are two options available; Under Projects Folder and Under Each User Project.

Default Export Path 1,2,3

default

Determines the default location for the export of an experiment.

Format Timepoint Display 1,2,3

Relative Time Scheduled Priority

Determines if inspections are grouped based on the absolute time or the relative time with respect to the imaging date.

Independent Log Level

INFO

Select to chose which log information will be shown in the ROCK MAKER log. There are four options; VERBOSE, INFO, WARNING, and ERROR.

Screen Default Plate Type 1,2,3

(none)

Determines the default container (plate) to be used in screen experiment.

Screen Experiment Wizard Date Time Format 1,2,3

dd-MMM-yy

Determines the default date and time format of the experiments generated from the screen experiment wizard to be appended in the experiment names.

Screen Experiment Wizard Name Delimiter 1,2,3

Not Available

Determines the delimiter to be used in experiment names that generated from the screen experiment wizard.

Search & Filter - Enable Canvas 1,2,3

check_icon

Enables the canvas to appear in Search and Filter.

Show Close Button with Tab 1,3

check_icon

Enables each tab in the workspace to have a close button [x] next to the name of the tab.

Show Navigation Bar 1,3

check_icon

Shows the Navigation bar. For more information, please read Navigators

Show StartUp Tips 1,2,3

check_icon

Shows StartUp Tips when you open ROCK MAKER software. For more information, please read Startup Tips

Show what’s new at upgrade 1,3

Not Selected

Shows what’s new in the release when upgrading from the previous version.

Slide Show - Slide change interval 1,3

5

Determines how many seconds it takes to move between drops in Slide Show. For more information, please read Viewing Images in a Slideshow.

Zoom Lock 1

check_icon

Enables the Zoom Lock feature.

Advanced Properties

System Property

Default Setting

Description

Access Control: Refresh Permissions on context menu

Not Selected

Allows access control to refresh the context menu.

Application: Email ID for Usage Report

usability@formulatrix.com

Reports the user’s usage data when using ROCK MAKER. for more information, please read Usage Statistics.

Auto Image Management Start Time

23:00:00

Sets the time for Auto Image Management processes to begin.

Auto Image Management Stop Time

06:00:00

Sets the time for Auto Image Management processes to end.

AutoUpdate: Enable

check_icon

Automatically updates to the latest software available.

AutoUpdate: path: URL

http://formulatrix.com/downloads/apps/release/productupdate.xml

Determines the location of the auto updates.

AutoUpdate: Proxy: Host

Not Available

Shows the name of the proxy server.

AutoUpdate: Proxy: password

Not Available

Shows the proxy password.

AutoUpdate: Proxy Port

80

Shows the name of the proxy port.

AutoUpdate: Proxy: User Name

Not Available

Shows the proxy user name.

Container: Enable drops by default

check_icon

Determines whether a new container’s drops will be enabled by default.

Clean Shared files folder

Not Selected

Select to delete unused files from the shared folders.

Crystal Track: Enable integration

Not Selected

Enables Crystal Track integration menu option in the context menu on the explorer.

Crystal Track: Plate Types

Not Available

Determines the plate type to be exported in Crystal Track.

Crystal Track: Version

0

Determines the Instance version of the Crystal Track software.

Database: Command timeout

30

Determines how much time in seconds it takes for ROCK MAKER to display the timeout message during the execution of a database command.

Database: Max Pool Size

15

Determines the maximum amount of time in seconds that a user must wait to establish a connection to the database.

Database: Search command timeout (override)

-1

Determines how much time in seconds it takes for ROCK MAKER to display the timeout message when executing a search.

Dispensing: Show default run queue

Not Selected

Displays the run queue of a single dispensing robot.

Error messages: Attach Log File

check_icon

Allows the email alert to support to attach the file activity log when an error exception occurs.

Error Messages: Notification checked default

check_icon

When an unexpected error occurs, ROCK MAKER lets you know by displaying a pop-up message that gives you the option of notifying FORMULATRIX that the error occurred. The Error notification checked setting controls whether the Notify Formulatrix checkbox is selected by default.

Error Messages: Number of Log Files To Attach

1

Specifies how many file logs will be attached in the support email.

Error messages: Recipient

support@formulatrix.com

Shows the FORMULATRIX email address that will receive the error notification.

Error Messages: Sender

rockmaker@formulatrix.com

Shows the email address that will send the error notification to FORMULATRIX support.

Error messages: SMTP Enable SSL

Not Selected

Enables SMTP server to require SSL for authentication.

Error messages: SMTP Password

Not Available

Shows the password required to authenticate the SMTP server with the specified user name.

Error messages: SMTP Port

25

Shows the SMTP port number.

Error messages: SMTP Server

mail.customer.com

Shows the SMTP server that is used to send error notifications to FORMULATRIX.

Error messages: SMTP User Name

Not Available

Shows the username used to authenticate the SMTP server.

Experiment plate: Allow barcode editing

Not Selected

Enables the Edit Barcode option on the context menu on the experiment plate.

Experiment plate: Annotation font scale (um/pt)

2

Shows the font scale used for annotation.

Experiment plate: Number of batches in memory

3

Determines the number of batches in memory for your experiment plate.

Experiment plate: Region default optics type

Not Selected

The optics selected here will be used as the default optic type. For example, if you have visible imaging with QImaging optics and visible imaging with PixeLINK optics, the imager will automatically use the QImaging optics when you draw a visible light Region of Interest.

Experiment plate: Reset image handle between drops

check_icon

Determines whether the zoom setting resets when the user switches drops in Region view.

Experiment plate: Save images with annotations

Not Selected

Determines whether or not annotations are saved along with images.

Experiment: Add lot during convert to screen

check_icon

Determines whether a screen lot is automatically created when the user right-clicks an experiment or plate on the explorer and selects Convert to Screen.

Experiment: Allow convert to screen experiment from tree

Not Selected

Determines whether the Convert to Screen Experiment option appears when the user right-clicks an experiment or plate on the explorer.

Experiment: Allow convert to screen from tree

check_icon

Determines whether the Convert to Screen option appears when the user right-clicks an experiment or plate on the explorer.

Experiment: Allow editing of Readonly Experiment

check_icon

Enables the user to make changes to a dispensed, or locked, experiment.

Experiment: Allow experiment plate deletion

check_icon

Enables the user to delete plate type definitions.

Experiment: Default: Paste Conditions External Delimiter

t

Shows the character that will separate the pasted condition.

Experiment: Precision (Concentration)

3

Determines the number of precision for Concentration.

Experiment: Precision (pH)

2

Determines the number of precision for pH.

Experiment: Precision (Volume)

3

Determines the number of precision for Volume.

Experiment: Printing: Show Stock concentrations

Not Selected

Determines whether or not the stock concentrations are shown by default in an experiment.

Experiment: Printing: Well header shading

Not Selected

Determines whether or not the well headers are shaded in the printed version of an experiment.

Experiment: SignificantDigits (Concentration)

5

Displays the number of significant digits for a concentration value.

Experiment: SignificantDigits (pH)

4

Displays the number of significant digits for a pH value.

Experiment: SignificantDigits (Volume)

5

Displays the number of significant digits for a volume value.

Importing: Match Ingredients Stock: Buffer

Lowest Concentration

When the user is importing a screen, this value determines which stock is used when the ROCK MAKER database does not already contain a buffer stock that is being imported. There are four options available: Highest Lot Number, Lowest Lot Number, Highest Concentration and Lowest Concentration. For more information, please read Buffer.

Importing: Match Ingredient Stock: Non-Buffer

Lowest Concentration

When the user is importing a screen, this value determines which stock is used when the ROCK MAKER database does not already contain a non-buffer stock that is being imported. There are four options available: Highest Lot Number, Lowest Lot Number, Highest Concentration and Lowest Concentration.

Importing: Protein import file type

None

Allows users to import protein ingredients from an .XML file by right-clicking the Protein Formulation Ingredients table. There are two options available: FORMULATRIX and None. For more information, please read Importing Compound Protein Formulations from a Text File in Creating Protein Formulations.

Ingredient Picker: Show Tool Tip

check_icon

Shows the tooltip when using the ingredient picker to add ingredients.

Ingredient Picker: Show vendor name in drop down

check_icon

Shows the Vendor column when adding or editing a standard ingredient.

Ingredient Picker: Show vendor part number in drop

check_icon

Shows the Vendor column when adding or editing a standard ingredient.

Ingredient stock: Concentration units

%, %v/v, %w/v, mM, M

Determines the concentration units.

Ingredient Stock: Default: Dispense order

1

Determines the default dispense order for a new ingredient stock.

Ingredient stock: Default: Liquid class

Not Available

Determines the default liquid class assigned to a new ingredient stock.

Ingredient: Show long name

check_icon

Adds the incoming ingredient’s long name to the existing ingredient’s list of aliases when you decide to keep the existing ingredient during an ingredient merge. This will prevent a conflict the next time that ingredient is imported.

Ingredient: Stock Hide irrelevant columns based upon Ingredient types in use

Not Selected

Hides the extra stock columns in the Ingredient dialog.

Ingredient: Stock: Keep Vendor Part Numbers Unique

check_icon

Matches the vendor name and part number of stocks from .XML and current stocks of same ingredient in system.

License Request: Recipient

support@formulatrix.com

Determines the email address used for requesting a product license. For more information, please read Online License Activation.

License: Master Server URL

http://www.formulatrix.com/downloads/licenses

Determines the URL address which contains the licensing files. For more information, please read Online License Activation.

Memory notification trigger override (% of RAM)

0

Defines the maximum amount of computer memory ROCK MAKER is allowed to use before an email is sent to notify FORMULATRIX support of high memory usage. By default, no notification will be sent at any level of memory usage.

Plate Type: Enable drops by default

check_icon

Select to automatically enable Plate Drop when creating a new Plate Type.

PlateControl Part Columns

4

Determines the number of columns of wells per page in the Ingredient View and Image Thumbnail View for the Experiment Print Summary.

PlateControl Part Rows

6

Determines the number of rows of wells per page in the Ingredient View and Image Thumbnail View for the Experiment Print Summary.

Screen: Vendor URL

http://www.formulatrix.com/downloads/redirects/rm/screens.html

Allows you to set the website for the Vendor Screen.

Screen: Allow screen experiment repair

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Determines whether the screens can be modified or not after they have been used in an experiment. For more information, please read Repairing a Screen.

Screen: Export: Allow ROCK MAKER XML export

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Determines whether screens can be exported to ROCK MAKER .XML from the Explorer.

Screen: Export: Allow server basic XML export

Not Selected

Determines whether users can export screens in regular .XML format.

Screen: Export: Allow text file export

Not Selected

Enables the menu option allowing the export of a screen as a text file.

Screen: Import: Allow Fluidgm CSV file import

Not Selected

Determines whether the “Import Fluidigm CSV Screen” context menu option appears when a user attempts to import a .CSV file.

Screen: Import: Allow ROCK MAKER XML import

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Determines whether screens are imported using ROCK MAKER .XML format.

Screen: Import: Allow server basic XML import

Not Selected

Determines whether screens are imported using a basic .XML format

Screen: Import: Allow text file import

Not Selected

Enables the menu option allowing the import of a screen as a text file.

Screen: Import: ROCK MAKER XML: Add incoming ingredient long name as an alias

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Adds the incoming ingredient’s long name to the existing ingredient’s list of aliases when you decide to keep the existing ingredient during an ingredient merge. This will prevent a conflict the next time that ingredient is imported.

Screen: import: ROCK MAKER XML: Include vendor name and part number in stock comparison

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Matches the vendor name and part number of stocks from an .XML import and current stocks of the same ingredient in the system.

Screen: Import: ROCK MAKER XML: Use the next higher concentration stock if a matching stock not found

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When you import an ingredient stock with a concentration less than the existing ingredient stocks, the incoming ingredient stock will not be added to the existing ingredient. If the incoming stock has a higher concentration, however, it will be added to the ingredient.

Screen: Server: Basic XML export URL

Not Available

Determines the URL to which the .XML file is pushed when a screen is exported to an .XML file.

Screen: Server: Basic XML import URL

Not Available

Determines the URL from which the .XML file is pulled when a screen is imported from an .XML file.

Search and Filter: Page size

1000

Sets the size of the Search and Filter page.

Search and Filter: Significant digits after decimal point

4

Sets how many digits will appear after a decimal point in Search and Filter.

Search and Filter: Enable custom rounding

Not Selected

Applies custom rounding.

Search: Old Search Enabled

Not Selected

Disables the old search functionality.

Show “Stay Signed in” Option on login

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Enables the retention of user preferences based on user login. For more information, please read Setting Up and Managing Users.

Show last logged in user name on login

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Adjusts the behavior of ROCK MAKER to remember which user was previously logged in. For more information, please read Setting Up and Managing Users.

Storage: Root attachment path

Not Available

Shows the root directory in which protein formulation attachments are stored.

SurveyURL: Path: URL

http://www.surveymonkey.com/s/Y92TSDY

Determines the survey path URL.

Tree: Show Database files

Not Selected

Displays the database file in tree node.

Tree: Show Tool Tip Message

Not Selected

Shows tooltip messages in the tree.

Usable Memory (%)

None

Shows the amount of memory available in ROCK MAKER, as a percentage.

Videos: URL

http://www.formulatrix.com/downloads/redirects/rm/help_videos.html

Sets the URL address for ROCK MAKER videos

Plate Properties

The Plate Properties as Seen from Global Preferences Menu

The Plate Properties as Seen from Global Preferences Menu

Plate Properties control how the plate you are using is managed by ROCK MAKER. The available properties are shown in the below table:

Note:

1 — Property is available in Global Preferences.
2 — Property is available in Group Preferences.
3 — Property is available in User Preferences.

System Property

Default Setting

Description

Plate Specific properties 1,2,3

96 Deep Well, 2mL

Determines your Plates Experiment. You can choose your Plate from the list.

Plate Default Imaging Schedule 1,2,3

None

Determines the plate Imaging Schedule. There are Five options: (None), Daily/Weekly, Daily/Weekly Nightly, Fibonacci and Fibonacci Nightly.

Plate Type ID 1

00

Shows the unique two-digit value printed on the barcode, which the dispensing robot uses to identify a particular plate.

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