ROCK MAKER

TABLE OF CONTENTS

  • ROCK MAKER® Crystallization Software Online User Manual
  • What’s New in ROCK MAKER 3.18?
  • System Requirements
  • The ROCK MAKER Software (Overview)
    • The Ribbon
      • Application Menu Button
      • Home Tab
      • Experiment Contextual Tab
      • Images Contextual Tab
      • Screen Contextual Tab
    • The Explorer
      • Plate State Icons
    • The Canvas
    • The View Bar
      • The Ingredients Tab
    • Personalization
    • Authorization
    • Startup Tips
    • Mouse Commands and Keyboard Shortcuts
  • Experiment Design
    • Experiment Design Concepts
      • Experiment Design Overview
      • Projects
      • Protein Formulations
      • Screens and Experiments
      • Fragment Screens
      • Iterative Screen Optimization (ISO)
      • Layers Overview
        • Grid Layers
        • Random Layers
        • Custom Layers
        • Protein Layers
        • Seeding Layers
        • Screen Layers
        • Fragment Layers
    • Experiment Design Tutorials
      • Designing Experiments
        • Creating a Project
        • Creating an Experiment
        • Adding Ingredients and Working with Layers
        • Creating Protein Formulations
        • Creating Fragment Screens
      • Creating Layers
        • Creating a Grid Design Layer
        • Creating a Random Layer
        • Creating a Protein Layer
        • Creating a Custom Layer
        • Creating a Seed and Adding a Seeding Layer
        • Creating a Fragment Layer
      • Working With Screens
        • Creating a Screen
        • Creating a Screen Lot
        • Importing Screen Conditions
        • Rotating a Screen Canvas
      • Creating Experiments in Batch
      • Finding Drops in a Plate
      • Creating an Optimization Experiment
      • Creating an Iterative Screen Optimization (ISO)
      • Editing Dispensed Experiments
      • Exporting Wells to an XML Screen File
      • Adding Tags and Printing Plate Labels
  • Dispensing
    • Dispense Overview
    • The Dispensing Tab
    • Dispensing Drops to Experiment Plates
    • Manually Marking Plates as Dispensed
    • Dispensing Properties
    • Tracking Ingredients with the Rack Editor
    • Printing Dispense Instructions
  • Viewing and Scoring Images
    • Concepts
      • Viewing Images Overview
      • Well, Drop, and Compare Tabs
      • Image Tools
      • Inspections
      • Navigators
      • Scoring Overview
        • Scoring Images Using Autoscoring Models
    • Tutorials
      • Working With Images
      • Adjusting Image Viewing Settings
      • Scoring Images
        • Filtering Hits Based on Scores
        • Scoring without Images
        • Using MARCO/Sherlock
          • Setting Up Auto Scoring Models
          • Sending Images to Autoscoring
          • Sending Images for Autoscoring Training
  • Crystal Tracking
    • Concepts
      • Crystal Management
    • Tutorials
      • Creating Puck and Dewar Definitions
      • Creating a Synchrotron Trip
      • Harvesting Crystals
      • Reviewing Crystal Track Data
  • Search and Filter
    • Search and Filter Interface
    • Edit Filters
    • Performing a Search
    • Graphs
    • Using Sample Searches
    • Comparing Images from Search Results
    • Finding Successful Screens
    • Searching for Drops without Scores
    • Copying Search and Filter Results to a Text Editor
    • Exporting Charts from Search and Filter
    • Exporting and Printing Search Results
  • Reports
    • Experiment Reports
    • Single Drop Reports
    • Ingredients Reports
    • Image Reports
    • Design Reports
    • Score Reports
    • Exporting FRAP Data Points
    • Instant Drop Reports
    • Well Report
    • Hits Report
    • Synchrotron Trip Report
  • Best Practices
    • General Best Practices
    • When in Doubt, Right-Click or Explore ROCK MAKER University
    • Seeding Experiments
    • Only Print Barcodes When Experiment Design is Complete
    • Viewing Search Results
    • Adding a Protein Layer
    • Resolving Imported Screen Condition Conflicts
    • Repairing a Screen
  • Administration
    • Setup
      • Setup Concepts
        • ROCK MAKER Setup Overview
        • Plate Types Setup
        • Ingredient Setup
        • General Setup
        • Imager Quota
        • Administrator and User Setup
        • System Properties
        • Imaging Node
        • Image Scheduling
        • Imaging Settings
        • Dispensing Properties
      • Setup Tutorials
        • Adding Plate Types
        • Assigning a Default Imaging Schedule to a Plate
        • Adding a Purchased Screen Lot
        • Setting Up a Global Imaging Schedule
        • Adding Score Groups and Scores
        • Enabling and Disabling Autoscores
        • Enabling and Disabling Import Focus Level
        • Defining Imaging Settings
        • Using FRAP Imaging Settings
        • Setup Users and Groups
        • Working with Ingredients
          • Adding and Editing Ingredients
          • Importing, Merging, and Exporting Ingredients
          • Importing Ingredients Using the DoE Tool
          • Searching for Ingredients
          • Printing Ingredient Labels
          • Calculating Buffer Titration Curves
          • Viewing the Buffer Mixing Curve
    • Image Management
      • Image Management
      • Creating an Image Management Task
      • Executing Image Management Tasks
      • Finding Orphan Images with Image Cleanup
      • Viewing Image Storage Usage
      • Deleting Images
    • Licensing
      • Online License Activation
      • Manual License Activation
      • License Activation and Reactivation
    • Usage Statistics
  • FAQs (Frequently Asked Questions)
  • How to Use This Help File
  • Appendix
    • RMXML Schema
ROCK MAKER
  • »
  • Experiment Design »
  • Experiment Design Concepts

Experiment Design Concepts¶

  • Experiment Design Overview

  • Projects

  • Protein Formulations

  • Fragment Screens

  • Screens and Experiments

  • Iterative Screen Optimization (ISO)

  • Layers Overview

  • Grid Layers

  • Random Layers

  • Custom Layers

  • Protein Layers

  • Fragment Layers

  • Seeding Layers

  • Screen Layers



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